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Identification of necroptosis-related subtypes, development of a novel signature, and characterization of immune infiltration in colorectal cancer

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单位: [1]Huazhong Univ Sci & Technol, Tongji Med Coll, Inst Liver & Gastrointestinal Dis, Dept Gastroenterol,Tongji Hosp,Hubei Key Lab Hepat, Wuhan, Hubei, Peoples R China [2]Huazhong Univ Sci & Technol, Tongji Hosp, Tongji Med Coll, Hepat Surg Ctr,Hubei Key Lab Hepatopancreato Bilia, Wuhan, Hubei, Peoples R China [3]Minist Educ, Key Lab Organ Transplantat, Wuhan, Hubei, Peoples R China [4]Minist Publ Hlth, Wuhan, Hubei, Peoples R China [5]Huazhong Univ Sci & Technol, Coll Life Sci & Technol, Dept Biomed Engn, Key Lab Biomed Photon MOE,Wuhan Natl Lab Optoelect, Wuhan, Peoples R China
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关键词: colorectal cancer necroptosis signature subtypes immune infiltration

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IntroductionNecroptosis, a type of programmed cell death, has recently been extensively studied as an important pathway regulating tumor development, metastasis, and immunity. However, the expression patterns of necroptosis-related genes (NRGs) in colorectal cancer (CRC) and their potential roles in the tumor microenvironment (TME) have not been elucidated. MethodsWe explored the expression patterns of NRGs in 1247 colorectal cancer samples from genetics and transcriptional perspective. Based on a consensus clustering algorithm, we identified NRG molecular subtypes and gene subtypes, respectively. Furthermore, we constructed a necroptosis-related signature for predicting overall survival time and verified the predictive ability of the model. Using the ESTIMATE, CIBERSORT, and ssGSEA algorithms, we assessed the association between the above subtypes, scores and immune infiltration. ResultsMost NRGs were differentially expressed between CRC tissues and normal tissues. We found that distinct subtypes exhibited different NRGs expression, patients' prognosis, immune checkpoint gene expression, and immune infiltration characteristics. The scores calculated from the necroptosis-related signature can be used to classify patients into high-risk and low-risk groups, with the high-risk group corresponding to reduced immune cell infiltration and immune function, and a greater risk of immune dysfunction and immune escape. DiscussionOur comprehensive analysis of NRGs in CRC demonstrated their potential role in clinicopathological features, prognosis, and immune infiltration in the TME. These findings help us deepen our understanding of NRGs and the tumor microenvironment landscape, and lay a foundation for effectively assessing patient outcomes and promoting more effective immunotherapy.

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出版当年[2021]版:
大类 | 2 区 医学
小类 | 2 区 免疫学
最新[2025]版:
大类 | 2 区 医学
小类 | 2 区 免疫学
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Q1 IMMUNOLOGY
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Q1 IMMUNOLOGY

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第一作者单位: [1]Huazhong Univ Sci & Technol, Tongji Med Coll, Inst Liver & Gastrointestinal Dis, Dept Gastroenterol,Tongji Hosp,Hubei Key Lab Hepat, Wuhan, Hubei, Peoples R China
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通讯机构: [2]Huazhong Univ Sci & Technol, Tongji Hosp, Tongji Med Coll, Hepat Surg Ctr,Hubei Key Lab Hepatopancreato Bilia, Wuhan, Hubei, Peoples R China [3]Minist Educ, Key Lab Organ Transplantat, Wuhan, Hubei, Peoples R China [4]Minist Publ Hlth, Wuhan, Hubei, Peoples R China
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