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Integrative analysis of CRISPR screening data uncovers new opportunities for optimizing cancer immunotherapy

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单位: [1]Shanghai Jiao Tong Univ, State Key Lab Oncogenes & Related Genes, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [2]Shanghai Jiao Tong Univ, Key Lab Gastroenterol & Hepatol, Minist Hlth, Sch Med,Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [3]Shanghai Jiao Tong Univ, Div Gastroenterol & Hepatol, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [4]Shanghai Jiao Tong Univ, Shanghai Inst Digest Dis, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [5]Sun Yat Sen Univ, Zhongshan Sch Med, Guangzhou 510080, Peoples R China [6]Shanghai Jiao Tong Univ, Renji Hosp, Shanghai Canc Inst, State Key Lab Oncogenes & Related Genes,Sch Med, Shanghai 200001, Peoples R China [7]Huazhong Univ Sci Ence & Technol, Tongji Hosp, Tongji Med Coll, Hepat Surg Ctr, Wuhan 430030, Peoples R China [8]German Canc Res Ctr, Immune Regulat Canc Grp, D-69120 Heidelberg, Germany [9]Sun Yat Sen Univ, Guangdong Prov Key Lab Malignant Tumor Epigenet &, Sun Yat Sen Mem Hosp, Guangzhou 510120, Peoples R China [10]Sun Yat Sen Univ, Key Lab Trop Dis Control, Minist Educ, Guangzhou 510080, Peoples R China [11]Sun Yat Sen Univ, Guangdong Engn & Technol Res Ctr Dis Model Anim, Lab Anim Ctr, Zhongshan Sch Med, Guangzhou 510080, Peoples R China [12]Sun Yat Sen Univ, Ctr Precis Med, Guangzhou 510080, Peoples R China
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关键词: CRISPR screen Tumor immunity MON2 Immune checkpoint blockade Drug repurposing Connectivity map

摘要:
Background In recent years, the application of functional genetic immuno-oncology screens has showcased the striking ability to identify potential regulators engaged in tumor-immune interactions. Although these screens have yielded substantial data, few studies have attempted to systematically aggregate and analyze them. Methods In this study, a comprehensive data collection of tumor immunity-associated functional screens was performed. Large-scale genomic data sets were exploited to conduct integrative analyses. Results We identified 105 regulator genes that could mediate resistance or sensitivity to immune cell-induced tumor elimination. Further analysis identified MON2 as a novel immune-oncology target with considerable therapeutic potential. In addition, based on the 105 genes, a signature named CTIS (CRISPR screening-based tumor-intrinsic immune score) for predicting response to immune checkpoint blockade (ICB) and several immunomodulatory agents with the potential to augment the efficacy of ICB were also determined. Conclusion Overall, our findings provide insights into immune oncology and open up novel opportunities for improving the efficacy of current immunotherapy agents.

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出版当年[2021]版:
大类 | 1 区 医学
小类 | 1 区 生化与分子生物学 1 区 肿瘤学
最新[2025]版:
大类 | 1 区 医学
小类 | 1 区 生化与分子生物学 1 区 肿瘤学
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出版当年[2020]版:
Q1 ONCOLOGY Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
最新[2023]版:
Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Q1 ONCOLOGY

影响因子: 最新[2023版] 最新五年平均 出版当年[2020版] 出版当年五年平均 出版前一年[2019版] 出版后一年[2021版]

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第一作者单位: [1]Shanghai Jiao Tong Univ, State Key Lab Oncogenes & Related Genes, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [2]Shanghai Jiao Tong Univ, Key Lab Gastroenterol & Hepatol, Minist Hlth, Sch Med,Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [3]Shanghai Jiao Tong Univ, Div Gastroenterol & Hepatol, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [4]Shanghai Jiao Tong Univ, Shanghai Inst Digest Dis, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [5]Sun Yat Sen Univ, Zhongshan Sch Med, Guangzhou 510080, Peoples R China
通讯作者:
通讯机构: [1]Shanghai Jiao Tong Univ, State Key Lab Oncogenes & Related Genes, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [2]Shanghai Jiao Tong Univ, Key Lab Gastroenterol & Hepatol, Minist Hlth, Sch Med,Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [3]Shanghai Jiao Tong Univ, Div Gastroenterol & Hepatol, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [4]Shanghai Jiao Tong Univ, Shanghai Inst Digest Dis, Sch Med, Renji Hosp, 145 Middle Shandong Rd, Shanghai 200001, Peoples R China [5]Sun Yat Sen Univ, Zhongshan Sch Med, Guangzhou 510080, Peoples R China [9]Sun Yat Sen Univ, Guangdong Prov Key Lab Malignant Tumor Epigenet &, Sun Yat Sen Mem Hosp, Guangzhou 510120, Peoples R China [10]Sun Yat Sen Univ, Key Lab Trop Dis Control, Minist Educ, Guangzhou 510080, Peoples R China [11]Sun Yat Sen Univ, Guangdong Engn & Technol Res Ctr Dis Model Anim, Lab Anim Ctr, Zhongshan Sch Med, Guangzhou 510080, Peoples R China [12]Sun Yat Sen Univ, Ctr Precis Med, Guangzhou 510080, Peoples R China
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